STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK03911.1RDD domain-containing protein. (277 aa)    
Predicted Functional Partners:
KXK01404.1
Membrane protein.
    0.905
KXK00412.1
Hypothetical protein.
 
    0.780
KXK00413.1
Hypothetical protein.
 
    0.779
KXK00838.1
Hypothetical protein.
  
     0.756
KXK03910.1
Hypothetical protein.
       0.618
KXK03912.1
NAD-dependent epimerase/dehydratase.
       0.556
KXK00636.1
Von Willebrand factor A.
  
     0.541
KXK03909.1
ECF subfamily RNA polymerase sigma-24 factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.521
rlmN
Cfr family radical SAM protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.406
Your Current Organism:
Acidobacteria bacterium OLB17
NCBI taxonomy Id: 1617423
Other names: A. bacterium OLB17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.