STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK03282.1Pyridoxal-5'-phosphate-dependent protein subunit beta. (304 aa)    
Predicted Functional Partners:
KXJ98738.1
Homoserine dehydrogenase.
  
 0.854
metH
Methionine synthase.
  
 0.747
KXK06983.1
2-oxoacid:ferredoxin/flavodoxin oxidoreductase subunit gamma family protein.
    
 0.741
KXK04220.1
Methionine synthase I/5,10-methylenetetrahydrofolate reductase.
  
 0.740
KXK00432.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit beta.
     
 0.708
KXK05299.1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
 
 0.682
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.652
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
 0.642
KXK02110.1
Alcohol dehydrogenase zinc-binding domain-containing protein.
   
 
  0.625
KXK05255.1
Endoribonuclease L-PSP.
 
 0.610
Your Current Organism:
Acidobacteria bacterium OLB17
NCBI taxonomy Id: 1617423
Other names: A. bacterium OLB17
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