STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXJ98821.1Hypothetical protein. (319 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.845
KXK04236.1
PAS/PAC sensor signal transduction histidine kinase.
  
 0.810
KXK06950.1
Two component transcriptional regulator, LuxR family.
   
 0.793
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.781
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.781
KXJ99531.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.768
KXK02900.1
Thioredoxin reductase.
  
 0.758
KXK01471.1
Thioredoxin-disulfide reductase.
  
 0.758
KXK00737.1
Thioredoxin reductase.
  
 0.758
KXJ98267.1
Ribose-5-phosphate isomerase.
  
 
 0.758
Your Current Organism:
Acidobacteria bacterium OLB17
NCBI taxonomy Id: 1617423
Other names: A. bacterium OLB17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.