STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXJ98715.1Multidrug ABC transporter ATPase/permease. (588 aa)    
Predicted Functional Partners:
KXJ99191.1
Oligopeptide/dipeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.927
KXJ99192.1
Oligopeptide/dipeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.899
lgrD
Linear gramicidin synthase subunit D.
  
 0.826
KXK07152.1
AMP-dependent synthetase/ligase.
  
 0.826
KXJ98714.1
Phenylacetic acid degradation-related protein.
       0.752
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
    
 0.725
KXJ98150.1
Spermidine/putrescine ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
  
 
0.636
KXJ98716.1
Hypothetical protein.
       0.618
KXK07375.1
Efflux ABC transporter ATP-binding protein.
  
0.546
KXK01405.1
ABC transporter ATPase.
  
  
 
0.544
Your Current Organism:
Acidobacteria bacterium OLB17
NCBI taxonomy Id: 1617423
Other names: A. bacterium OLB17
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