STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXJ98725.1Peptidase S41. (547 aa)    
Predicted Functional Partners:
KXJ98726.1
AraC family transcriptional regulator.
       0.580
KXK07066.1
Ankyrin repeat-containing protein.
   
 0.572
KXK01553.1
Ankyrin repeat-containing protein.
   
 0.572
KXK04746.1
Gluconolactonase.
  
  0.522
KXK05307.1
Ankyrin repeat-containing protein.
   
 
 0.484
tdk
Thymidine kinase.
  
     0.458
KXK06490.1
IPT/TIG domain, FG-GAP repeat-containing protein.
   
  0.449
sdrE
Serine-aspartate repeat-containing protein E precursor.
   
  0.449
KXK06508.1
Hypothetical protein.
   
  0.449
KXK05441.1
Hypothetical protein.
   
  0.449
Your Current Organism:
Acidobacteria bacterium OLB17
NCBI taxonomy Id: 1617423
Other names: A. bacterium OLB17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.