STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK27480.1Pyridoxal-phosphate dependent enzyme. (192 aa)    
Predicted Functional Partners:
serB
Phosphoserine phosphatase.
  
 0.914
aspC
Aspartate aminotransferase.
  
 0.817
KXK27478.1
Biotin carboxylase-like protein.
  
    0.791
KXK27002.1
Serine/threonine protein kinase.
    
 0.782
KXK27477.1
Hypothetical protein.
       0.774
KXK27476.1
Protein phosphatase 2C.
       0.773
KXK27479.1
Methyltransferase domain protein.
       0.773
KXK27481.1
Threonine synthase.
       0.773
spoT
Bifunctional (p)ppGpp synthase/hydrolase SpoT.
  
 
  0.756
znuB
High-affinity zinc uptake system membrane protein ZnuB.
    
  0.734
Your Current Organism:
candidate division WS6 bacterium OLB20
NCBI taxonomy Id: 1617426
Other names: c. division WS6 bacterium OLB20
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