STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mreCCell shape-determining protein MreC precursor. (264 aa)    
Predicted Functional Partners:
mreB_1
Rod shape-determining protein MreB.
  
 
 0.960
spoVD
Stage V sporulation protein D.
 
 
 0.936
KXK26661.1
Penicillin binding protein transpeptidase domain protein.
 
 
 0.872
mreB_2
Rod shape-determining protein MreB.
  
 
 0.832
KXK26663.1
Hypothetical protein.
       0.773
pbpB_1
Penicillin-binding protein 2B.
  
 
 0.674
pbpB_2
Penicillin-binding protein 2B.
  
 
 0.674
rsmA
Ribosomal RNA small subunit methyltransferase A; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
 
  
 0.579
mpl
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase.
  
  
 0.510
ftsX
Cell division protein FtsX; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.494
Your Current Organism:
candidate division WS6 bacterium OLB20
NCBI taxonomy Id: 1617426
Other names: c. division WS6 bacterium OLB20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.