STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK39624.1Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. (111 aa)    
Predicted Functional Partners:
yycF
Transcriptional regulatory protein YycF.
  
 
 0.946
fliN
Flagellar motor switch protein FliN.
  
   0.935
rsbU_1
Phosphoserine phosphatase RsbU.
 
 0.920
tcyN
L-cystine import ATP-binding protein TcyN.
   
  0.910
rsbU_3
Phosphoserine phosphatase RsbU.
 
 0.904
KXK32266.1
Mce related protein.
  
  0.903
mlaE
Putative phospholipid ABC transporter permease protein MlaE; Belongs to the MlaE permease family.
   
  0.901
zraR_1
Transcriptional regulatory protein ZraR.
  
 0.879
rsbU_2
Phosphoserine phosphatase RsbU.
 
 0.865
mprA_2
Response regulator MprA.
  
 0.835
Your Current Organism:
Omnitrophica bacterium OLB16
NCBI taxonomy Id: 1617433
Other names: O. bacterium OLB16, candidate division OP3 bacterium OLB16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.