STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wbbL_1N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase. (141 aa)    
Predicted Functional Partners:
epsH_4
Putative glycosyltransferase EpsH.
 
 
 0.998
KXK31678.1
Tyrosine kinase.
  
 
 0.997
kpsD
Polysialic acid transport protein KpsD precursor.
  
 
 0.993
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
 
 0.992
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 
 0.991
wcaJ_3
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 
 0.991
epsH_2
Putative glycosyltransferase EpsH.
 
 
 0.989
pgaC
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
 
 
 0.982
rfbM
Mannose-1-phosphate guanylyltransferase RfbM.
  
 
 0.978
KXK39621.1
Hypothetical protein.
 
 
 0.973
Your Current Organism:
Omnitrophica bacterium OLB16
NCBI taxonomy Id: 1617433
Other names: O. bacterium OLB16, candidate division OP3 bacterium OLB16
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