STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC_4Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (312 aa)    
Predicted Functional Partners:
rbsB_1
D-ribose-binding periplasmic protein precursor.
  0.988
rbsB_3
D-ribose-binding periplasmic protein precursor.
  0.983
rbsA_2
Ribose import ATP-binding protein RbsA.
 0.963
xylG
Xylose import ATP-binding protein XylG.
 0.962
rbsA_1
Ribose import ATP-binding protein RbsA.
 0.961
alsB
D-allose-binding periplasmic protein precursor.
  0.959
yphF
ABC transporter periplasmic-binding protein YphF precursor.
  0.891
rbsB_2
D-ribose-binding periplasmic protein precursor.
  0.890
rbsB_4
D-ribose-binding periplasmic protein precursor.
  0.888
lsrB
Autoinducer 2-binding protein LsrB precursor.
  0.876
Your Current Organism:
Omnitrophica bacterium OLB16
NCBI taxonomy Id: 1617433
Other names: O. bacterium OLB16, candidate division OP3 bacterium OLB16
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