STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mshA_3D-inositol 3-phosphate glycosyltransferase. (358 aa)    
Predicted Functional Partners:
wbbL_2
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
 
    0.899
KXK37635.1
Alpha amylase, catalytic domain.
   
  0.850
pimA_2
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase.
  
     0.771
mshA_5
D-inositol 3-phosphate glycosyltransferase.
  
     0.766
epsD_2
Putative glycosyltransferase EpsD.
  
     0.762
mfpsA_2
Mannosylfructose-phosphate synthase.
  
     0.751
rfaG
Lipopolysaccharide core biosynthesis protein RfaG.
  
     0.741
pimB_3
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase.
  
     0.737
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
 
 0.702
wcaJ_3
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
 
 0.692
Your Current Organism:
Omnitrophica bacterium OLB16
NCBI taxonomy Id: 1617433
Other names: O. bacterium OLB16, candidate division OP3 bacterium OLB16
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