STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlhHCarboxylesterase NlhH. (333 aa)    
Predicted Functional Partners:
ppsA
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA.
  
 0.987
hndA_2
NADP-reducing hydrogenase subunit HndA.
    
  0.987
KXK29269.1
Long-chain-fatty-acid--AMP ligase FadD32.
  
 0.983
cmdD
Chondramide synthase cmdD.
  
 0.982
hndC_1
NADP-reducing hydrogenase subunit HndC.
    
  0.981
preT
NAD-dependent dihydropyrimidine dehydrogenase subunit PreT.
  
 0.948
nuoC
NADH-quinone oxidoreductase subunit C/D; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
    
   0.945
ppsB
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsB.
  
 0.917
petC
Cytochrome b6-f complex iron-sulfur subunit.
    
  0.906
nuoG
NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
    
 0.895
Your Current Organism:
Omnitrophica bacterium OLB16
NCBI taxonomy Id: 1617433
Other names: O. bacterium OLB16, candidate division OP3 bacterium OLB16
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.