STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK28720.1Putative ABC transporter ATP-binding protein. (243 aa)    
Predicted Functional Partners:
macB_2
Macrolide export ATP-binding/permease protein MacB.
  0.974
macB_3
Macrolide export ATP-binding/permease protein MacB.
  0.973
yknZ
Putative ABC transporter permease YknZ.
  0.971
oppD_2
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
  
 
0.932
ytrF
ABC transporter permease YtrF precursor.
 
 0.862
lolC
Lipoprotein-releasing system transmembrane protein LolC.
 0.839
KXK28721.1
FtsX-like permease family protein.
 
 
  0.839
cysT
Sulfate transport system permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.
 
 
 
  0.806
gsiD_2
Glutathione transport system permease protein GsiD.
 
 
 
  0.796
KXK35139.1
Hypothetical protein.
   
 
 0.791
Your Current Organism:
Omnitrophica bacterium OLB16
NCBI taxonomy Id: 1617433
Other names: O. bacterium OLB16, candidate division OP3 bacterium OLB16
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