STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK28739.1Bacterial extracellular solute-binding protein. (675 aa)    
Predicted Functional Partners:
KXK36287.1
Hypothetical protein.
  
  0.831
araQ_9
L-arabinose transport system permease protein AraQ.
  
  0.810
ycjO
Inner membrane ABC transporter permease protein YcjO.
  
  0.803
KXK28736.1
Hypothetical protein.
       0.773
KXK28737.1
Hypothetical protein.
       0.773
KXK28738.1
Hypothetical protein.
       0.773
KXK36286.1
Hypothetical protein.
  
  0.768
KXK28111.1
Glycerol-3-phosphate transporter periplasmic binding protein.
  
  0.684
msmE
Multiple sugar-binding protein precursor.
  
     0.678
KXK39883.1
Bacterial extracellular solute-binding protein.
  
  
 0.665
Your Current Organism:
Omnitrophica bacterium OLB16
NCBI taxonomy Id: 1617433
Other names: O. bacterium OLB16, candidate division OP3 bacterium OLB16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.