STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000000035G patch domain containing 1. (941 aa)    
Predicted Functional Partners:
ENSAPEP00000012874
Coiled-coil domain containing 12.
    
 0.977
ENSAPEP00000026563
SYF2 pre-mRNA-splicing factor.
    
  0.976
ENSAPEP00000018467
YJU2 splicing factor homolog.
    
  0.956
ENSAPEP00000010286
WD repeat domain containing 83.
    
 
 0.954
ENSAPEP00000007915
Cell division cycle 40 homolog (S. cerevisiae).
    
  0.951
ENSAPEP00000027269
Mtr4 exosome RNA helicase.
   
 0.931
ENSAPEP00000002872
Pleiotropic regulator 1.
    
 
 0.929
ENSAPEP00000019196
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.925
ENSAPEP00000026669
Serine/arginine repetitive matrix 1.
     
 0.924
ENSAPEP00000003698
CWC22 spliceosome associated protein homolog.
    
  0.916
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.