STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000000037WD repeat domain 59. (929 aa)    
Predicted Functional Partners:
ENSAPEP00000001692
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.999
ENSAPEP00000004226
NPR2 like, GATOR1 complex subunit.
    
 0.999
ENSAPEP00000009266
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
 0.999
ENSAPEP00000009535
WD repeat domain 24.
    
0.999
ENSAPEP00000015773
DEP domain containing 5.
   
 0.999
ENSAPEP00000033831
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
0.999
ENSAPEP00000016040
Uncharacterized protein.
    
 0.994
ENSAPEP00000016101
NPR3-like, GATOR1 complex subunit.
    
 0.994
ENSAPEP00000017531
Kaptin (actin binding protein).
    
 0.989
ENSAPEP00000027069
Si:ch211-125a15.1.
    
 0.989
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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