STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001005Tetratricopeptide repeat domain 8. (513 aa)    
Predicted Functional Partners:
ENSAPEP00000027301
Bardet-Biedl syndrome 7.
  
 0.998
ENSAPEP00000003194
Bardet-Biedl syndrome 9.
  
 
 0.997
ENSAPEP00000013861
Bardet-Biedl syndrome 1.
   
 0.997
ENSAPEP00000031422
Bardet-Biedl syndrome 2 protein homolog.
  
 0.997
ENSAPEP00000004188
Bardet-Biedl syndrome 4.
   
0.996
ENSAPEP00000028461
Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.
  
 0.976
ENSAPEP00000015958
Leucine zipper transcription factor-like 1.
  
 0.962
ENSAPEP00000008001
BBSome interacting protein 1.
    
 0.944
ENSAPEP00000034873
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.943
ENSAPEP00000009524
BTB domain-containing protein.
   
 0.928
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.