STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001014Retinoblastoma-like 2 (p130). (454 aa)    
Predicted Functional Partners:
ENSAPEP00000010292
Transcription factor.
   
 0.990
ENSAPEP00000000608
E2F transcription factor 4.
   
 0.974
ENSAPEP00000004175
E2F_TDP domain-containing protein.
   
 0.968
ENSAPEP00000015956
Lin-52 DREAM MuvB core complex component.
    
 0.968
E2F3
E2F transcription factor 3.
   
 0.968
ENSAPEP00000008902
E2F transcription factor 1.
   
 0.966
ENSAPEP00000008661
Cyclin E1; Belongs to the cyclin family.
   
 0.964
CCNE2
Cyclin E2; Belongs to the cyclin family.
   
 0.964
ENSAPEP00000003362
Cyclin D1; Belongs to the cyclin family.
    
 0.958
ENSAPEP00000027826
Cyclin D2, b; Belongs to the cyclin family.
    
 0.958
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.