STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001127Vacuolar protein sorting 13 homolog A. (3212 aa)    
Predicted Functional Partners:
ENSAPEP00000001679
CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae).
    
   0.627
ENSAPEP00000000341
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.618
ENSAPEP00000029552
Synaptojanin 1.
    
 
 0.574
ENSAPEP00000018803
Uncharacterized protein.
    
 
 0.567
ENSAPEP00000018821
Cyclin G associated kinase.
    
 
 0.567
ENSAPEP00000009180
VPS39 subunit of HOPS complex.
   
 
 0.519
ENSAPEP00000013237
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
 
 0.504
ENSAPEP00000014942
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 
 0.492
ENSAPEP00000011747
Centrin 3.
    
 
 0.473
ENSAPEP00000006314
Baculoviral IAP repeat containing 6.
   
 
 0.466
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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