Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSAPEP00000000945 | ENSAPEP00000001140 | ENSAPEP00000000945 | ENSAPEP00000001140 | Small ubiquitin-related modifier. | Nucleophosmin 1b. | 0.752 |
ENSAPEP00000000945 | ENSAPEP00000015729 | ENSAPEP00000000945 | ENSAPEP00000015729 | Small ubiquitin-related modifier. | Eukaryotic translation elongation factor 1 gamma. | 0.752 |
ENSAPEP00000000945 | ENSAPEP00000017927 | ENSAPEP00000000945 | ENSAPEP00000017927 | Small ubiquitin-related modifier. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.860 |
ENSAPEP00000001140 | ENSAPEP00000000945 | ENSAPEP00000001140 | ENSAPEP00000000945 | Nucleophosmin 1b. | Small ubiquitin-related modifier. | 0.752 |
ENSAPEP00000001140 | ENSAPEP00000003821 | ENSAPEP00000001140 | ENSAPEP00000003821 | Nucleophosmin 1b. | Nucleolin. | 0.950 |
ENSAPEP00000001140 | ENSAPEP00000015729 | ENSAPEP00000001140 | ENSAPEP00000015729 | Nucleophosmin 1b. | Eukaryotic translation elongation factor 1 gamma. | 0.796 |
ENSAPEP00000001140 | ENSAPEP00000017927 | ENSAPEP00000001140 | ENSAPEP00000017927 | Nucleophosmin 1b. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.871 |
ENSAPEP00000001140 | ENSAPEP00000019052 | ENSAPEP00000001140 | ENSAPEP00000019052 | Nucleophosmin 1b. | Uncharacterized protein. | 0.950 |
ENSAPEP00000001140 | ENSAPEP00000020735 | ENSAPEP00000001140 | ENSAPEP00000020735 | Nucleophosmin 1b. | Cyclin-dependent kinase inhibitor 2A/B (p15, inhibits CDK4). | 0.768 |
ENSAPEP00000001140 | ENSAPEP00000022242 | ENSAPEP00000001140 | ENSAPEP00000022242 | Nucleophosmin 1b. | Nucleophosmin/nucleoplasmin, 3. | 0.813 |
ENSAPEP00000001140 | ENSAPEP00000024008 | ENSAPEP00000001140 | ENSAPEP00000024008 | Nucleophosmin 1b. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.779 |
ENSAPEP00000001140 | RPL5 | ENSAPEP00000001140 | ENSAPEP00000020445 | Nucleophosmin 1b. | Ribosomal protein L5. | 0.871 |
ENSAPEP00000001140 | RPL5-2 | ENSAPEP00000001140 | ENSAPEP00000033428 | Nucleophosmin 1b. | Ribosomal protein L5b. | 0.871 |
ENSAPEP00000003821 | ENSAPEP00000001140 | ENSAPEP00000003821 | ENSAPEP00000001140 | Nucleolin. | Nucleophosmin 1b. | 0.950 |
ENSAPEP00000003821 | ENSAPEP00000017927 | ENSAPEP00000003821 | ENSAPEP00000017927 | Nucleolin. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.727 |
ENSAPEP00000003821 | ENSAPEP00000022242 | ENSAPEP00000003821 | ENSAPEP00000022242 | Nucleolin. | Nucleophosmin/nucleoplasmin, 3. | 0.428 |
ENSAPEP00000003821 | RPL5 | ENSAPEP00000003821 | ENSAPEP00000020445 | Nucleolin. | Ribosomal protein L5. | 0.619 |
ENSAPEP00000003821 | RPL5-2 | ENSAPEP00000003821 | ENSAPEP00000033428 | Nucleolin. | Ribosomal protein L5b. | 0.619 |
ENSAPEP00000015729 | ENSAPEP00000000945 | ENSAPEP00000015729 | ENSAPEP00000000945 | Eukaryotic translation elongation factor 1 gamma. | Small ubiquitin-related modifier. | 0.752 |
ENSAPEP00000015729 | ENSAPEP00000001140 | ENSAPEP00000015729 | ENSAPEP00000001140 | Eukaryotic translation elongation factor 1 gamma. | Nucleophosmin 1b. | 0.796 |
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