ENSAPEP00000001159 protein (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSAPEP00000001159

Multiple C2 domains, transmembrane 2b. (877 aa)

Predicted Functional Partners:

ENSAPEP00000006449

0.668

ENSAPEP00000010612

0.668

ENSAPEP00000010639

0.668

ENSAPEP00000014448

0.450

ENSAPEP00000019991

0.414

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSAPEP00000001159	ENSAPEP00000006449	Multiple C2 domains, transmembrane 2b.	Intersectin 2b.	0.668
ENSAPEP00000001159	ENSAPEP00000010612	Multiple C2 domains, transmembrane 2b.	Uncharacterized protein.	0.668
ENSAPEP00000001159	ENSAPEP00000010639	Multiple C2 domains, transmembrane 2b.	Uncharacterized protein.	0.668
ENSAPEP00000001159	ENSAPEP00000014448	Multiple C2 domains, transmembrane 2b.	Ribosomal protein S27a.	0.450
ENSAPEP00000001159	ENSAPEP00000019991	Multiple C2 domains, transmembrane 2b.	Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.	0.414
ENSAPEP00000006449	ENSAPEP00000001159	Intersectin 2b.	Multiple C2 domains, transmembrane 2b.	0.668
ENSAPEP00000006449	ENSAPEP00000010612	Intersectin 2b.	Uncharacterized protein.	0.985
ENSAPEP00000006449	ENSAPEP00000010639	Intersectin 2b.	Uncharacterized protein.	0.985
ENSAPEP00000006449	ENSAPEP00000014448	Intersectin 2b.	Ribosomal protein S27a.	0.719
ENSAPEP00000010612	ENSAPEP00000001159	Uncharacterized protein.	Multiple C2 domains, transmembrane 2b.	0.668
ENSAPEP00000010612	ENSAPEP00000006449	Uncharacterized protein.	Intersectin 2b.	0.985
ENSAPEP00000010612	ENSAPEP00000010639	Uncharacterized protein.	Uncharacterized protein.	0.987
ENSAPEP00000010612	ENSAPEP00000014448	Uncharacterized protein.	Ribosomal protein S27a.	0.719
ENSAPEP00000010639	ENSAPEP00000001159	Uncharacterized protein.	Multiple C2 domains, transmembrane 2b.	0.668
ENSAPEP00000010639	ENSAPEP00000006449	Uncharacterized protein.	Intersectin 2b.	0.985
ENSAPEP00000010639	ENSAPEP00000010612	Uncharacterized protein.	Uncharacterized protein.	0.987
ENSAPEP00000010639	ENSAPEP00000014448	Uncharacterized protein.	Ribosomal protein S27a.	0.719
ENSAPEP00000014448	ENSAPEP00000001159	Ribosomal protein S27a.	Multiple C2 domains, transmembrane 2b.	0.450
ENSAPEP00000014448	ENSAPEP00000006449	Ribosomal protein S27a.	Intersectin 2b.	0.719
ENSAPEP00000014448	ENSAPEP00000010612	Ribosomal protein S27a.	Uncharacterized protein.	0.719