ENSAPEP00000001161 protein (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSAPEP00000001161

Uncharacterized protein. (173 aa)

Predicted Functional Partners:

ENSAPEP00000009308

0.988

ENSAPEP00000003478

0.981

ENSAPEP00000030538

0.976

ENSAPEP00000021782

0.972

ENSAPEP00000025909

0.969

SNRPD1

0.967

ENSAPEP00000020949

0.967

ENSAPEP00000024245

0.966

ENSAPEP00000031078

0.960

ENSAPEP00000021987

0.946

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPEP00000001161	ENSAPEP00000003478	ENSAPEP00000001161	ENSAPEP00000003478	Uncharacterized protein.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.981
ENSAPEP00000001161	ENSAPEP00000009308	ENSAPEP00000001161	ENSAPEP00000009308	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20.	0.988
ENSAPEP00000001161	ENSAPEP00000020949	ENSAPEP00000001161	ENSAPEP00000020949	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.967
ENSAPEP00000001161	ENSAPEP00000021782	ENSAPEP00000001161	ENSAPEP00000021782	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.972
ENSAPEP00000001161	ENSAPEP00000021987	ENSAPEP00000001161	ENSAPEP00000021987	Uncharacterized protein.	Gem (nuclear organelle) associated protein 8.	0.946
ENSAPEP00000001161	ENSAPEP00000024245	ENSAPEP00000001161	ENSAPEP00000024245	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.966
ENSAPEP00000001161	ENSAPEP00000025909	ENSAPEP00000001161	ENSAPEP00000025909	Uncharacterized protein.	Chloride channel, nucleotide-sensitive, 1A.	0.969
ENSAPEP00000001161	ENSAPEP00000030538	ENSAPEP00000001161	ENSAPEP00000030538	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.976
ENSAPEP00000001161	ENSAPEP00000031078	ENSAPEP00000001161	ENSAPEP00000031078	Uncharacterized protein.	Small nuclear ribonucleoprotein polypeptide F.	0.960
ENSAPEP00000001161	SNRPD1	ENSAPEP00000001161	ENSAPEP00000017530	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.967
ENSAPEP00000003478	ENSAPEP00000001161	ENSAPEP00000003478	ENSAPEP00000001161	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Uncharacterized protein.	0.981
ENSAPEP00000003478	ENSAPEP00000009308	ENSAPEP00000003478	ENSAPEP00000009308	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20.	0.977
ENSAPEP00000003478	ENSAPEP00000020949	ENSAPEP00000003478	ENSAPEP00000020949	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.976
ENSAPEP00000003478	ENSAPEP00000021782	ENSAPEP00000003478	ENSAPEP00000021782	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.987
ENSAPEP00000003478	ENSAPEP00000021987	ENSAPEP00000003478	ENSAPEP00000021987	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Gem (nuclear organelle) associated protein 8.	0.931
ENSAPEP00000003478	ENSAPEP00000024245	ENSAPEP00000003478	ENSAPEP00000024245	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Small nuclear ribonucleoprotein G.	0.974
ENSAPEP00000003478	ENSAPEP00000025909	ENSAPEP00000003478	ENSAPEP00000025909	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Chloride channel, nucleotide-sensitive, 1A.	0.965
ENSAPEP00000003478	ENSAPEP00000030538	ENSAPEP00000003478	ENSAPEP00000030538	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Small nuclear ribonucleoprotein Sm D2.	0.996
ENSAPEP00000003478	ENSAPEP00000031078	ENSAPEP00000003478	ENSAPEP00000031078	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Small nuclear ribonucleoprotein polypeptide F.	0.977
ENSAPEP00000003478	SNRPD1	ENSAPEP00000003478	ENSAPEP00000017530	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.976