ENSAPEP00000001208 protein (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSAPEP00000001208

Reverse transcriptase domain-containing protein. (375 aa)

Predicted Functional Partners:

ENSAPEP00000028620

0.811

ENSAPEP00000004068

0.645

ENSAPEP00000004692

0.643

ENSAPEP00000022143

0.643

ENSAPEP00000025201

0.643

ENSAPEP00000019673

0.640

ENSAPEP00000001134

0.632

ENSAPEP00000003732

0.632

ENSAPEP00000005975

0.632

ENSAPEP00000008063

0.632

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSAPEP00000001134	ENSAPEP00000001208	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Reverse transcriptase domain-containing protein.	0.632
ENSAPEP00000001134	ENSAPEP00000003732	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Mitochondrial ribosomal protein L43.	0.988
ENSAPEP00000001134	ENSAPEP00000004068	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.999
ENSAPEP00000001134	ENSAPEP00000004692	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	SIL1 nucleotide exchange factor.	0.971
ENSAPEP00000001134	ENSAPEP00000005975	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Death associated protein 3.	0.999
ENSAPEP00000001134	ENSAPEP00000008063	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Mitochondrial ribosomal protein L47.	0.995
ENSAPEP00000001134	ENSAPEP00000019673	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.996
ENSAPEP00000001134	ENSAPEP00000022143	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1.	0.971
ENSAPEP00000001134	ENSAPEP00000025201	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein L10.	0.971
ENSAPEP00000001134	ENSAPEP00000028620	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.998
ENSAPEP00000001208	ENSAPEP00000001134	Reverse transcriptase domain-containing protein.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.632
ENSAPEP00000001208	ENSAPEP00000003732	Reverse transcriptase domain-containing protein.	Mitochondrial ribosomal protein L43.	0.632
ENSAPEP00000001208	ENSAPEP00000004068	Reverse transcriptase domain-containing protein.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.645
ENSAPEP00000001208	ENSAPEP00000004692	Reverse transcriptase domain-containing protein.	SIL1 nucleotide exchange factor.	0.643
ENSAPEP00000001208	ENSAPEP00000005975	Reverse transcriptase domain-containing protein.	Death associated protein 3.	0.632
ENSAPEP00000001208	ENSAPEP00000008063	Reverse transcriptase domain-containing protein.	Mitochondrial ribosomal protein L47.	0.632
ENSAPEP00000001208	ENSAPEP00000019673	Reverse transcriptase domain-containing protein.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.640
ENSAPEP00000001208	ENSAPEP00000022143	Reverse transcriptase domain-containing protein.	HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1.	0.643
ENSAPEP00000001208	ENSAPEP00000025201	Reverse transcriptase domain-containing protein.	Ribosomal protein L10.	0.643
ENSAPEP00000001208	ENSAPEP00000028620	Reverse transcriptase domain-containing protein.	Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.811