STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001301Bardet-Biedl syndrome 12. (642 aa)    
Predicted Functional Partners:
ENSAPEP00000021550
Uncharacterized protein.
    
 0.928
ENSAPEP00000032860
McKusick-Kaufman syndrome.
    
 0.928
ENSAPEP00000031880
T-complex 1.
    
 0.892
ENSAPEP00000027301
Bardet-Biedl syndrome 7.
   
 0.869
ENSAPEP00000032768
Chaperonin containing TCP1, subunit 8 (theta).
    
 0.755
ENSAPEP00000009001
T-complex protein 1 subunit delta.
    
 0.744
ENSAPEP00000026321
T-complex protein 1 subunit gamma.
    
 0.744
ENSAPEP00000032073
Chaperonin containing TCP1, subunit 5 (epsilon).
    
 0.744
ENSAPEP00000033711
Chaperonin containing TCP1, subunit 2 (beta).
    
 0.744
ENSAPEP00000003194
Bardet-Biedl syndrome 9.
    
 0.713
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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