STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001308Retinoblastoma-like 1 (p107). (996 aa)    
Predicted Functional Partners:
ENSAPEP00000010292
Transcription factor.
   
 0.987
ENSAPEP00000015956
Lin-52 DREAM MuvB core complex component.
    
 0.968
ENSAPEP00000000608
E2F transcription factor 4.
   
 0.958
ENSAPEP00000030102
Uncharacterized protein.
   
 0.958
ENSAPEP00000030127
E2F transcription factor 5.
   
 0.958
ENSAPEP00000008902
E2F transcription factor 1.
   
 0.956
ENSAPEP00000008661
Cyclin E1; Belongs to the cyclin family.
   
 0.953
ENSAPEP00000004175
E2F_TDP domain-containing protein.
   
 0.951
E2F3
E2F transcription factor 3.
   
 0.951
ENSAPEP00000025012
Si:ch211-160f23.5.
   
 0.951
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.