STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001318Collagen, type IV, alpha 1. (1190 aa)    
Predicted Functional Partners:
ENSAPEP00000013037
Link domain-containing protein.
    
  0.903
ENSAPEP00000018742
Integrin beta; Belongs to the integrin beta chain family.
    
 0.847
ENSAPEP00000007633
Integrin beta; Belongs to the integrin beta chain family.
    
 0.846
ENSAPEP00000021160
Integrin beta; Belongs to the integrin beta chain family.
    
 0.846
ENSAPEP00000029337
Integrin beta.
    
 0.845
ENSAPEP00000033144
Integrin beta; Belongs to the integrin beta chain family.
    
 0.845
ENSAPEP00000023446
Integrin beta; Belongs to the integrin beta chain family.
    
  0.841
ENSAPEP00000031843
Integrin, alpha 8; Belongs to the integrin alpha chain family.
    
 0.840
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
    
 0.833
ENSAPEP00000006369
Integrin, alpha 10; Belongs to the integrin alpha chain family.
     
 0.831
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.