STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001358RAB20, member RAS oncogene family. (263 aa)    
Predicted Functional Partners:
ENSAPEP00000030718
Uncharacterized protein.
   
 0.975
ENSAPEP00000034635
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.975
ENSAPEP00000034836
Uncharacterized protein.
   
 0.975
ENSAPEP00000003909
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
 0.916
ENSAPEP00000011061
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
 0.916
ENSAPEP00000023261
Rabenosyn, RAB effector.
   
 0.897
ENSAPEP00000005801
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.859
ENSAPEP00000017319
Uncharacterized protein.
    
 0.835
ENSAPEP00000027222
Alsin Rho guanine nucleotide exchange factor ALS2 b.
    
 0.835
ENSAPEP00000002019
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.828
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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