STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001394LEM domain containing 3. (859 aa)    
Predicted Functional Partners:
ENSAPEP00000020666
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.903
ENSAPEP00000000717
Mothers against decapentaplegic homolog.
    
 
 0.865
ENSAPEP00000003312
Mothers against decapentaplegic homolog.
    
 
 0.865
ENSAPEP00000005293
Mothers against decapentaplegic homolog.
    
 
 0.865
SMAD3
Mothers against decapentaplegic homolog.
    
 
 0.865
ENSAPEP00000020280
Lamin B1; Belongs to the intermediate filament family.
    
 0.852
ENSAPEP00000028201
Uncharacterized protein; Belongs to the intermediate filament family.
    
 0.852
ENSAPEP00000031214
Lamin B2; Belongs to the intermediate filament family.
    
 0.852
ENSAPEP00000031236
Lamin A; Belongs to the intermediate filament family.
    
 0.852
ENSAPEP00000013055
Barrier to autointegration factor 1.
   
 0.849
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.