STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001501Si:ch211-107o10.3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (329 aa)    
Predicted Functional Partners:
ENSAPEP00000002949
LRAT domain-containing protein.
   
 0.793
ENSAPEP00000001297
PNPLA domain-containing protein.
     
 0.790
ENSAPEP00000024952
Lecithin retinol acyltransferase b, tandem duplicate 2.
    
  0.789
ENSAPEP00000008883
Cytochrome b5 reductase 4.
  
 0.785
ENSAPEP00000021033
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.785
ENSAPEP00000006556
Si:ch211-131k2.3.
  
 0.777
ENSAPEP00000032481
Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
  0.775
ENSAPEP00000011977
Malonyl CoA:ACP acyltransferase (mitochondrial).
  
 0.768
ENSAPEP00000009146
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.764
FDX1
Ferredoxin 1.
  
 0.712
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.