STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001552LIM domain only 3. (78 aa)    
Predicted Functional Partners:
ENSAPEP00000000440
LIM domain binding 2a.
    
 0.923
ENSAPEP00000020415
LIM-domain binding 1b.
    
 0.923
ENSAPEP00000022034
LIM domain binding 1a.
    
 0.923
ENSAPEP00000011984
T-cell acute lymphocytic leukemia 1.
    
 0.790
ENSAPEP00000030701
BHLH domain-containing protein.
    
 0.790
ENSAPEP00000024542
GATA binding protein 3.
    
 0.723
ENSAPEP00000031747
Uncharacterized protein.
    
 0.713
ENSAPEP00000032910
GATA binding protein 1a.
    
 0.713
ENSAPEP00000000435
GATA binding protein 6.
    
 0.705
ENSAPEP00000004563
GATA binding protein 4.
    
 0.705
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.