STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001578Tripartite motif containing 55. (445 aa)    
Predicted Functional Partners:
ENSAPEP00000012117
Transmembrane protein 173.
    
  0.599
ENSAPEP00000022154
Ubiquitin-like domain-containing protein.
    
  0.578
ENSAPEP00000014448
Ribosomal protein S27a.
    
  0.565
ENSAPEP00000030755
PYD and CARD domain containing.
    
  0.527
ENSAPEP00000034631
Caspase a; Belongs to the peptidase C14A family.
   
 0.520
GAS7
Growth arrest specific 7.
    
  0.468
ENSAPEP00000028063
Growth arrest-specific 7a.
    
  0.468
ENSAPEP00000018987
Ubiquilin 4.
    
 0.467
ENSAPEP00000004562
Ro60, Y RNA binding protein.
    
  0.459
ENSAPEP00000005544
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.458
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.