STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001648DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family. (716 aa)    
Predicted Functional Partners:
ENSAPEP00000032171
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.828
ENSAPEP00000032945
Mago homolog, exon junction complex subunit.
    
 0.822
ENSAPEP00000032096
Splicing factor 3b, subunit 3.
   
 0.820
ENSAPEP00000011726
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
   
 0.815
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.810
ENSAPEP00000020313
Pre-mRNA processing factor 8.
   
 0.801
ENSAPEP00000006390
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
    
 0.798
ENSAPEP00000016557
EBNA1 binding protein 2.
   
 0.782
ENSAPEP00000018162
Splicing factor 3b, subunit 1.
   
 0.776
ENSAPEP00000023617
Uncharacterized protein.
   
 0.776
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.