STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001668ALX homeobox 4b. (364 aa)    
Predicted Functional Partners:
ENSAPEP00000026234
MADS-box domain-containing protein.
    
 0.599
SRF
Serum response factor.
    
 0.599
ENSAPEP00000033595
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
  0.574
ENSAPEP00000000440
LIM domain binding 2a.
    
 0.547
ENSAPEP00000020415
LIM-domain binding 1b.
    
 0.547
ENSAPEP00000022034
LIM domain binding 1a.
    
 0.547
ENSAPEP00000004137
Folliculogenesis specific bHLH transcription factor.
   
 0.489
LHX3
LIM homeobox 3.
   
0.476
ENSAPEP00000002994
LIM homeobox 4.
   
0.471
ENSAPEP00000022479
BARX homeobox 1.
   
 
0.454
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.