STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001679CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae). (861 aa)    
Predicted Functional Partners:
ENSAPEP00000027644
DNA replication and sister chromatid cohesion 1.
   
 0.999
ENSAPEP00000015385
Replication factor C (activator 1) 5.
   
 0.995
ENSAPEP00000003358
Replication factor C (activator 1) 2.
   
 0.994
ENSAPEP00000027878
Replication factor C (activator 1) 3.
   
 0.994
ENSAPEP00000031499
Replication factor C (activator 1) 4.
   
 0.994
ENSAPEP00000032514
DNA polymerase.
   
 0.993
ENSAPEP00000032158
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.990
ENSAPEP00000006060
CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae).
   
 0.989
ENSAPEP00000007441
CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae).
   
 0.989
ENSAPEP00000022437
DNA polymerase.
   
 0.989
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.