STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001692SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)    
Predicted Functional Partners:
ENSAPEP00000000037
WD repeat domain 59.
    
 0.999
ENSAPEP00000007260
Nucleoporin 133.
    
 0.999
ENSAPEP00000008263
Nucleoporin 43.
   
 0.999
ENSAPEP00000008322
Nucleoporin 98.
    
 0.999
ENSAPEP00000009266
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
0.999
ENSAPEP00000009535
WD repeat domain 24.
    
 0.999
ENSAPEP00000013168
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.999
ENSAPEP00000016622
Nucleoporin 160.
    
 0.999
RANBP2
RAN binding protein 2.
    
 0.999
ENSAPEP00000026715
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.