STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001789Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (538 aa)    
Predicted Functional Partners:
ENSAPEP00000007029
LTV1 ribosome biogenesis factor.
   
 0.999
ENSAPEP00000014489
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.998
ENSAPEP00000011499
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
  0.997
ENSAPEP00000019698
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.997
ENSAPEP00000024026
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
  0.997
ENSAPEP00000033000
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.997
ENSAPEP00000000038
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.991
ENSAPEP00000000043
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.991
ENSAPEP00000032116
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.987
RPS20
Ribosomal protein S20.
   
 0.981
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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