STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001802GA binding protein transcription factor subunit alpha. (440 aa)    
Predicted Functional Partners:
ENSAPEP00000016794
GA binding protein transcription factor subunit beta 2a.
    
 0.995
ENSAPEP00000003510
F11 receptor, tandem duplicate 1.
    
  0.802
ENSAPEP00000026234
MADS-box domain-containing protein.
    
 0.714
SRF
Serum response factor.
    
 0.714
ENSAPEP00000031817
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
   
 0.670
ENSAPEP00000016830
Runt-related transcription factor.
   
 0.661
ENSAPEP00000023653
Runt-related transcription factor.
   
 0.661
ENSAPEP00000026618
Runt-related transcription factor.
   
 0.661
ENSAPEP00000020529
Runt domain-containing protein.
   
 0.659
ENSAPEP00000022633
Transcription factor A, mitochondrial.
   
 
 0.655
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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