STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000001887Zgc:163098. (883 aa)    
Predicted Functional Partners:
ENSAPEP00000032078
RNA binding motif protein 17.
   
 0.985
ENSAPEP00000029784
Calcium homeostasis endoplasmic reticulum protein.
   
 0.968
ENSAPEP00000017232
Splicing factor 3a, subunit 2.
    
 0.934
ENSAPEP00000023408
U2 snRNP-associated SURP domain containing.
  
  
 
0.899
ENSAPEP00000031921
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
   
 0.893
ENSAPEP00000015107
Splicing factor 3a, subunit 1.
   
 0.883
ENSAPEP00000023628
PRP40 pre-mRNA processing factor 40 homolog A.
   
 
 0.865
ENSAPEP00000018162
Splicing factor 3b, subunit 1.
   
 0.853
ENSAPEP00000023617
Uncharacterized protein.
   
 0.853
ENSAPEP00000031078
Small nuclear ribonucleoprotein polypeptide F.
   
 0.849
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.