STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX39ADExD-box helicase 39A. (427 aa)    
Predicted Functional Partners:
ENSAPEP00000020442
Aly/REF export factor.
   
 0.991
ENSAPEP00000018927
RRM domain-containing protein.
   
 0.989
ENSAPEP00000007135
THO complex 2.
   
 0.987
ENSAPEP00000023469
SAP domain containing ribonucleoprotein.
   
 0.985
ENSAPEP00000026294
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
  
0.984
ENSAPEP00000032171
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.981
ENSAPEP00000001577
THO complex 1.
   
 0.980
ENSAPEP00000030655
THO complex 5.
   
 0.980
ENSAPEP00000002291
THO complex 7.
   
 0.976
ENSAPEP00000006905
Zinc finger CCCH-type containing 13.
   
 0.971
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.