Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSAPEP00000002012Crystallin beta gamma X; Belongs to the beta/gamma-crystallin family. (207 aa)    
Predicted Functional Partners:
ENSAPEP00000012239
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
      
 0.655
ENSAPEP00000034765
Uncharacterized protein.
      
 0.602
ENSAPEP00000024576
Retinal homeobox gene 3.
      
 0.484
BFSP1
Beaded filament structural protein 1; Belongs to the intermediate filament family.
      
 0.478
ENSAPEP00000010362
Uncharacterized protein.
      
 0.400
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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