STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000003103LSM12 homolog b. (196 aa)    
Predicted Functional Partners:
ENSAPEP00000008035
Ataxin 2-like.
    
 0.986
ENSAPEP00000015483
LsmAD domain-containing protein.
    
 0.986
ENSAPEP00000028524
Ataxin 2.
    
 0.986
ENSAPEP00000011207
tRNA selenocysteine 1 associated protein 1b.
    
 
 0.886
ENSAPEP00000012440
tRNA selenocysteine 1 associated protein 1a.
    
 
 0.886
ENSAPEP00000010196
DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.
    
 
 0.855
ENSAPEP00000018274
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.
    
 
 0.855
ENSAPEP00000029084
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.855
ENSAPEP00000030103
annotation not available
    
 
 0.855
ENSAPEP00000010689
Nuclear FMR1 interacting protein 2.
    
 
 0.762
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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