ENSAPEP00000003144 protein (Amphiprion percula)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSAPEP00000003144

Cyclin-dependent kinase 21; Belongs to the protein kinase superfamily. (313 aa)

Predicted Functional Partners:

ENSAPEP00000003362

0.943

ENSAPEP00000027826

0.932

ENSAPEP00000020595

0.931

ENSAPEP00000029860

0.931

ENSAPEP00000025333

0.925

ENSAPEP00000001148

0.920

ENSAPEP00000001186

0.920

ENSAPEP00000001308

0.909

ENSAPEP00000008231

0.900

ENSAPEP00000009666

0.900

Your Current Organism:

Amphiprion percula

NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSAPEP00000001148	ENSAPEP00000001308	Cyclin_C domain-containing protein.	Retinoblastoma-like 1 (p107).	0.936
ENSAPEP00000001148	ENSAPEP00000003144	Cyclin_C domain-containing protein.	Cyclin-dependent kinase 21; Belongs to the protein kinase superfamily.	0.920
ENSAPEP00000001148	ENSAPEP00000008231	Cyclin_C domain-containing protein.	Cyclin-dependent kinase inhibitor 1Cb.	0.935
ENSAPEP00000001148	ENSAPEP00000009666	Cyclin_C domain-containing protein.	Cyclin-dependent kinase inhibitor 1Bb.	0.935
ENSAPEP00000001148	ENSAPEP00000025333	Cyclin_C domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.953
ENSAPEP00000001148	ENSAPEP00000027826	Cyclin_C domain-containing protein.	Cyclin D2, b; Belongs to the cyclin family.	0.790
ENSAPEP00000001186	ENSAPEP00000001308	Cyclin D2, a.	Retinoblastoma-like 1 (p107).	0.936
ENSAPEP00000001186	ENSAPEP00000003144	Cyclin D2, a.	Cyclin-dependent kinase 21; Belongs to the protein kinase superfamily.	0.920
ENSAPEP00000001186	ENSAPEP00000003362	Cyclin D2, a.	Cyclin D1; Belongs to the cyclin family.	0.797
ENSAPEP00000001186	ENSAPEP00000008231	Cyclin D2, a.	Cyclin-dependent kinase inhibitor 1Cb.	0.935
ENSAPEP00000001186	ENSAPEP00000009666	Cyclin D2, a.	Cyclin-dependent kinase inhibitor 1Bb.	0.935
ENSAPEP00000001186	ENSAPEP00000025333	Cyclin D2, a.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.953
ENSAPEP00000001186	ENSAPEP00000027826	Cyclin D2, a.	Cyclin D2, b; Belongs to the cyclin family.	0.795
ENSAPEP00000001308	ENSAPEP00000001148	Retinoblastoma-like 1 (p107).	Cyclin_C domain-containing protein.	0.936
ENSAPEP00000001308	ENSAPEP00000001186	Retinoblastoma-like 1 (p107).	Cyclin D2, a.	0.936
ENSAPEP00000001308	ENSAPEP00000003144	Retinoblastoma-like 1 (p107).	Cyclin-dependent kinase 21; Belongs to the protein kinase superfamily.	0.909
ENSAPEP00000001308	ENSAPEP00000003362	Retinoblastoma-like 1 (p107).	Cyclin D1; Belongs to the cyclin family.	0.946
ENSAPEP00000001308	ENSAPEP00000008231	Retinoblastoma-like 1 (p107).	Cyclin-dependent kinase inhibitor 1Cb.	0.740
ENSAPEP00000001308	ENSAPEP00000009666	Retinoblastoma-like 1 (p107).	Cyclin-dependent kinase inhibitor 1Bb.	0.740
ENSAPEP00000001308	ENSAPEP00000020595	Retinoblastoma-like 1 (p107).	Cyclin D3; Belongs to the cyclin family.	0.943