STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000003628Cholesterol 25-hydroxylase like 3. (332 aa)    
Predicted Functional Partners:
ENSAPEP00000026471
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.850
ENSAPEP00000000508
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
     
 0.848
RNF5
Ring finger protein 5.
   
 0.842
ENSAPEP00000015499
Ring finger protein 185.
   
 0.842
ENSAPEP00000002235
Transmembrane and ubiquitin-like domain containing 1.
    
 
 0.832
ENSAPEP00000007236
Ring finger protein 170.
    
 
 0.826
ENSAPEP00000022154
Ubiquitin-like domain-containing protein.
    
 0.824
ENSAPEP00000018537
CWC25 spliceosome associated protein homolog.
   
    0.806
ENSAPEP00000010461
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.749
ENSAPEP00000029791
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.749
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.