STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000003647TAR DNA binding protein. (402 aa)    
Predicted Functional Partners:
ENSAPEP00000005922
Heterogeneous nuclear ribonucleoprotein M.
   
 0.926
ENSAPEP00000022807
RBR-type E3 ubiquitin transferase.
    
 0.920
ENSAPEP00000003708
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.918
ENSAPEP00000009222
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.918
ENSAPEP00000013913
Serine and arginine rich splicing factor 1a.
   
 0.918
ENSAPEP00000032877
Uncharacterized protein.
   
 0.918
ENSAPEP00000032044
Goosecoid.
    
   0.916
ENSAPEP00000005600
Potassium channel tetramerization domain containing 2.
   
  0.886
ENSAPEP00000004407
Heterogeneous nuclear ribonucleoprotein K.
   
 0.881
ENSAPEP00000027977
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.881
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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