Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ENSAPEP00000001125 | ENSAPEP00000003758 | Baculoviral IAP repeat containing 5a. | PCNA clamp associated factor. | 0.897 |
ENSAPEP00000001125 | ENSAPEP00000010361 | Baculoviral IAP repeat containing 5a. | Cell division cycle 20 homolog. | 0.982 |
ENSAPEP00000001125 | ENSAPEP00000012091 | Baculoviral IAP repeat containing 5a. | Nucleolar and spindle associated protein 1. | 0.919 |
ENSAPEP00000001125 | ENSAPEP00000019636 | Baculoviral IAP repeat containing 5a. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.934 |
ENSAPEP00000001125 | ENSAPEP00000022640 | Baculoviral IAP repeat containing 5a. | ASH domain-containing protein. | 0.881 |
ENSAPEP00000001125 | ENSAPEP00000024594 | Baculoviral IAP repeat containing 5a. | Centrosomal protein 55 like. | 0.876 |
ENSAPEP00000001125 | ENSAPEP00000030505 | Baculoviral IAP repeat containing 5a. | Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family. | 0.972 |
ENSAPEP00000003758 | ENSAPEP00000001125 | PCNA clamp associated factor. | Baculoviral IAP repeat containing 5a. | 0.897 |
ENSAPEP00000003758 | ENSAPEP00000010361 | PCNA clamp associated factor. | Cell division cycle 20 homolog. | 0.896 |
ENSAPEP00000003758 | ENSAPEP00000012091 | PCNA clamp associated factor. | Nucleolar and spindle associated protein 1. | 0.893 |
ENSAPEP00000003758 | ENSAPEP00000019636 | PCNA clamp associated factor. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.891 |
ENSAPEP00000003758 | ENSAPEP00000022640 | PCNA clamp associated factor. | ASH domain-containing protein. | 0.885 |
ENSAPEP00000003758 | ENSAPEP00000024594 | PCNA clamp associated factor. | Centrosomal protein 55 like. | 0.879 |
ENSAPEP00000003758 | ENSAPEP00000025333 | PCNA clamp associated factor. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.984 |
ENSAPEP00000003758 | ENSAPEP00000025796 | PCNA clamp associated factor. | Helicase ATP-binding domain-containing protein. | 0.891 |
ENSAPEP00000003758 | ENSAPEP00000025882 | PCNA clamp associated factor. | ERCC4 domain-containing protein. | 0.891 |
ENSAPEP00000003758 | ENSAPEP00000030505 | PCNA clamp associated factor. | Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family. | 0.920 |
ENSAPEP00000010361 | ENSAPEP00000001125 | Cell division cycle 20 homolog. | Baculoviral IAP repeat containing 5a. | 0.982 |
ENSAPEP00000010361 | ENSAPEP00000003758 | Cell division cycle 20 homolog. | PCNA clamp associated factor. | 0.896 |
ENSAPEP00000010361 | ENSAPEP00000012091 | Cell division cycle 20 homolog. | Nucleolar and spindle associated protein 1. | 0.923 |
page 1 of 4