STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000003897Nibrin. (849 aa)    
Predicted Functional Partners:
ENSAPEP00000016745
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.999
ENSAPEP00000024741
RAD50 homolog, double strand break repair protein.
   
 0.999
ENSAPEP00000024507
Uncharacterized protein.
    
 0.998
ENSAPEP00000029039
Non-specific serine/threonine protein kinase.
    
 0.997
ENSAPEP00000020029
BRCA1 associated RING domain 1.
    
 0.993
ENSAPEP00000012735
SAE2 domain-containing protein.
    
 0.990
ENSAPEP00000017354
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.984
ENSAPEP00000022861
Uncharacterized protein.
    
 0.979
ENSAPEP00000015327
Uncharacterized protein.
    
 0.970
ENSAPEP00000033438
PAX interacting (with transcription-activation domain) protein 1.
    
 0.970
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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