STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000004153Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family. (312 aa)    
Predicted Functional Partners:
ENSAPEP00000003040
RRM domain-containing protein.
   
 0.771
ENSAPEP00000003093
RRM domain-containing protein.
   
 0.771
ENSAPEP00000009407
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
  0.756
ENSAPEP00000010767
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
     
 0.745
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.744
SRSF11-2
Serine and arginine rich splicing factor 11.
   
 0.744
ENSAPEP00000004407
Heterogeneous nuclear ribonucleoprotein K.
   
 0.737
ENSAPEP00000027977
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.737
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
   
  
 0.716
ENSAPEP00000007162
TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
    
  0.713
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
Server load: medium (44%) [HD]