STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000004302GTPase activating protein (SH3 domain) binding protein 1. (495 aa)    
Predicted Functional Partners:
ENSAPEP00000016376
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.966
ENSAPEP00000001629
Cell cycle associated protein 1b.
   
 
 0.868
ENSAPEP00000011971
Cell cycle associated protein 1a.
   
 
 0.868
ENSAPEP00000032945
Mago homolog, exon junction complex subunit.
    
 0.824
ENSAPEP00000013771
Zgc:153681.
    
 0.821
UPF1
UPF1 RNA helicase and ATPase.
    
 0.819
ENSAPEP00000023048
Uncharacterized protein.
    
 0.819
ENSAPEP00000010689
Nuclear FMR1 interacting protein 2.
    
 
 0.793
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
     
 0.789
ENSAPEP00000011207
tRNA selenocysteine 1 associated protein 1b.
   
 
 0.774
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.