STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000004337Tpd52 like 2b. (200 aa)    
Predicted Functional Partners:
ENSAPEP00000016108
Tumor protein D52.
    
  
0.803
ENSAPEP00000016794
GA binding protein transcription factor subunit beta 2a.
    
  0.767
ENSAPEP00000008382
Tpd52 like 1.
    
 
0.743
ENSAPEP00000024110
SNAP associated protein.
   
 
  0.640
ENSAPEP00000001802
GA binding protein transcription factor subunit alpha.
    
   0.637
ENSAPEP00000020360
Mal, T cell differentiation protein 2 (gene/pseudogene).
   
 
 0.586
ENSAPEP00000001658
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 
  0.555
ENSAPEP00000032352
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 
  0.555
ENSAPEP00000002412
Negative regulator of ubiquitin-like proteins 1.
      
 0.553
ENSAPEP00000007778
Si:ch73-234b20.5.
     
 0.548
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.