STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPEP00000004352Ribosomal RNA adenine dimethylase domain containing 1. (585 aa)    
Predicted Functional Partners:
ENSAPEP00000033831
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.919
ENSAPEP00000000037
WD repeat domain 59.
    
 0.856
ENSAPEP00000009535
WD repeat domain 24.
    
 0.855
ENSAPEP00000009266
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
     
 0.793
ENSAPEP00000001692
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
     
 0.779
ENSAPEP00000014650
Cytosolic arginine sensor for mTORC1 subunit 2.
    
 0.736
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
    
 0.736
ENSAPEP00000015512
RNA helicase.
   
    0.565
ENSAPEP00000015687
SET domain containing 4.
   
  
 0.536
ENSAPEP00000007918
Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
      
 0.524
Your Current Organism:
Amphiprion percula
NCBI taxonomy Id: 161767
Other names: A. percula, Picasso clownfish, orange clownfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.